Sendemail to jliu@stat.harvard.edu or wwong@hsph.harvard.edu
Office (Wing H Wong): HSPH2, Room 441, 655 Huntington Ave, Boston, MA
02115
Phone: (617) 432-4912 Office
Hours: by
appointment
Office (Jun Liu):
711 Science Center,
1 Oxford Street, Cambridge, MA 02138
Office Phone: (617) 495-1600 Office Hours: by appointment
Class meets every Friday 1:30-3:20pm
Classroom: Kresge 502 (In SPH, 655
Huntington Ave)
· Reading
list for microarrays
· Lectures
1.
Introduction
to microarray experiments: principle and design
Some
links used in the lecture
2.
Microarray
designs and data cleaning (normalization, etc.)
A reading list for microarray analysis
3.
Clustering
methods: hierarchical clustering and tree harvest
Link to Pat Brown’s lab
for more microarray data
4.
Principal
component analysis, gene shaving, plaid model
Human cell cycle data in
Excel format and in plain text format
(you can analyze
it with your favorite method)
5.
Discriminant analysis, neural networks, etc.
Linear
discriminant analysis, Bayes rules, logistic regression etc.
Comparing
LDA and the neural network classifier.
6.
Support Vector Machine
Other course materials have
moved to the university website http://www.courses.fas.harvard.edu/~stat315
Access to the lecture notes
will require password (same as stat315a)
Contact the instructors for
password information