BEST - Binding-site Estimation Suite of Tools

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Overview Download Documentation Reference Contact

Overview BEST is a suite of motif-finding programs, including four motif-finding programs: AlignACE, BioProspector, Consensus, MEME, and the optimization program BioOptimizer configured for each of these programs. BEST was compiled on Linux, and thus it can only be run on Linux machines. Two compiled versions are provided to satisfy different linux versions. To check the linux version, type "gcc -v" Download BEST1.0.tar.gz (Applicable to old linux versions, such as Red Hat Linux 7.*, 8.*, SuSE 8.*) BEST1.0.1.tar.gz (Aplicable to new linux versions, such as Red Hat Linux 3.2.*, 3.3.*, SuSE 9.2) BEST.tar.gz (Source code version, which can be compiled if the target linux machine contains Qt libraries) Documentation To download the documentation for BEST as PDF file click here To download the documentation for BEST as Microsoft Word file click here Reference Che D., Jensen, S., Cai, L. and Liu JS. BEST: Binding-site Estimation Suite of Tools. To be submitted to the Journal of Bioinformatics Contact Email: dsche@uga.edu, jliu@stat.harvard.edu Miror WWW: http://www.cs.uga.edu/~che/BEST/ Dongsheng Che and Jun Liu Last updated 02/25/2005